HL_6YPU_004

3D structure

PDB id

6YPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-amikacin complex - 30S subunit body

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGUAAAGGCC

Length

11 nucleotides

Bulged bases

6YPU|1|2|G|262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YPU|1|2|G|254
6YPU|1|2|G|255
6YPU|1|2|G|256
6YPU|1|2|U|257
6YPU|1|2|A|258
6YPU|1|2|A|259
6YPU|1|2|A|260
6YPU|1|2|G|261
6YPU|1|2|G|262
6YPU|1|2|C|263
6YPU|1|2|C|264

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 4

Small subunit ribosomal RNA; SSU rRNA

Chain r

30S ribosomal protein S17

Chain u

30S ribosomal protein S20