HL_6YTF_011
3D structure
- PDB id
- 6YTF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUUCGGAU
- Length
- 9 nucleotides
- Bulged bases
- 6YTF|1|3|U|1133
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6YTF_011 not in the Motif Atlas
- Geometric match to HL_5TBW_021
- Geometric discrepancy: 0.3455
- The information below is about HL_5TBW_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56443.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
6YTF|1|3|A|1130
6YTF|1|3|U|1131
6YTF|1|3|U|1132
6YTF|1|3|U|1133
6YTF|1|3|C|1134
6YTF|1|3|G|1135
6YTF|1|3|G|1136
6YTF|1|3|A|1137
6YTF|1|3|U|1138
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
Coloring options: