HL_6Z6L_120
3D structure
- PDB id
- 6Z6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human CCDC124 bound to 80S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGUAACUAUGACU
- Length
- 13 nucleotides
- Bulged bases
- 6Z6L|1|L5|A|3760
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z6L_120 not in the Motif Atlas
- Homologous match to HL_8P9A_160
- Geometric discrepancy: 0.3263
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6Z6L|1|L5|A|3756
6Z6L|1|L5|G|3757
6Z6L|1|L5|U|3758
6Z6L|1|L5|A|3759
6Z6L|1|L5|A|3760
6Z6L|1|L5|C|3761
6Z6L|1|L5|U|3762
6Z6L|1|L5|A|3763
6Z6L|1|L5|U|3764
6Z6L|1|L5|G|3765
6Z6L|1|L5|A|3766
6Z6L|1|L5|C|3767
6Z6L|1|L5|U|3768
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: