HL_6ZCE_021
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6ZCE|1|A|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZCE_021 not in the Motif Atlas
- Homologous match to HL_4V88_208
- Geometric discrepancy: 0.2236
- The information below is about HL_4V88_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6ZCE|1|A|G|997
6ZCE|1|A|A|998
6ZCE|1|A|U|999
6ZCE|1|A|C|1000
6ZCE|1|A|A|1001
6ZCE|1|A|G|1002
6ZCE|1|A|A|1003
6ZCE|1|A|U|1004
6ZCE|1|A|A|1005
6ZCE|1|A|C|1006
6ZCE|1|A|C|1007
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain P
- 40S ribosomal protein S14-A
- Chain b
- 40S ribosomal protein S26-A
- Chain m
- Eukaryotic translation initiation factor eIF-1
Coloring options: