HL_6ZM5_004
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GACUAACCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_004 not in the Motif Atlas
- Homologous match to HL_8VTW_016
- Geometric discrepancy: 0.4569
- The information below is about HL_8VTW_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76539.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 20
Unit IDs
6ZM5|1|A|G|1831
6ZM5|1|A|A|1832
6ZM5|1|A|C|1833
6ZM5|1|A|U|1834
6ZM5|1|A|A|1835
6ZM5|1|A|A|1836
6ZM5|1|A|C|1837
6ZM5|1|A|C|1838
6ZM5|1|A|C|1839
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain K
- 39S ribosomal protein L13, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain a
- 39S ribosomal protein L42, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
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