HL_6ZM5_007

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UAAAAGA

Length

7 nucleotides

Bulged bases

6ZM5|1|A|G|1939

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZM5_007 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.3319

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

6ZM5|1|A|U|1934
6ZM5|1|A|A|1935
6ZM5|1|A|A|1936
6ZM5|1|A|A|1937
6ZM5|1|A|A|1938
6ZM5|1|A|G|1939
6ZM5|1|A|A|1940

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain D

39S ribosomal protein L2, mitochondrial