HL_6ZM5_024
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GUACCCUAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_024 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.374
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ZM5|1|A|G|2574
6ZM5|1|A|U|2575
6ZM5|1|A|A|2576
6ZM5|1|A|C|2577
6ZM5|1|A|C|2578
6ZM5|1|A|C|2579
6ZM5|1|A|U|2580
6ZM5|1|A|A|2581
6ZM5|1|A|A|2582
6ZM5|1|A|C|2583
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain w
- Transfer RNA; tRNA
- Chain x
- Transfer RNA; tRNA
Coloring options: