HL_6ZM5_027
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- UUGGGGCGA
- Length
- 9 nucleotides
- Bulged bases
- 6ZM5|1|A|G|2814
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_027 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.0877
- The information below is about HL_4WF9_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
6ZM5|1|A|U|2812
6ZM5|1|A|U|2813
6ZM5|1|A|G|2814
6ZM5|1|A|G|2815
6ZM5|1|A|G|2816
6ZM5|1|A|G|2817
6ZM5|1|A|C|2818
6ZM5|1|A|G|2819
6ZM5|1|A|A|2820
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain x
- Transfer RNA; tRNA
Coloring options: