HL_6ZSE_035

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGUUCAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_035 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.1533

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.3

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6ZSE|1|XA|C|2202
6ZSE|1|XA|G|2203
6ZSE|1|XA|U|2204
6ZSE|1|XA|U|2205
6ZSE|1|XA|C|2206
6ZSE|1|XA|A|2207
6ZSE|1|XA|A|2208
6ZSE|1|XA|G|2209

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XJ

39S ribosomal protein L11, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial