HL_6ZSE_039

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CAAG

Length

4 nucleotides

Bulged bases

6ZSE|1|XA|A|2401

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_039 not in the Motif Atlas

Geometric match to HL_5F9R_002

Geometric discrepancy: 0.112

The information below is about HL_5F9R_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6ZSE|1|XA|C|2400
6ZSE|1|XA|A|2401
6ZSE|1|XA|A|2402
6ZSE|1|XA|G|2403

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain XD

39S ribosomal protein L2, mitochondrial