HL_6ZTL_050

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6ZTL|1|BA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTL_050 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1684

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6ZTL|1|BA|A|382
6ZTL|1|BA|C|383
6ZTL|1|BA|A|384
6ZTL|1|BA|C|385
6ZTL|1|BA|G|386
6ZTL|1|BA|U|387
6ZTL|1|BA|G|388
6ZTL|1|BA|G|389
6ZTL|1|BA|U|390
6ZTL|1|BA|A|391
6ZTL|1|BA|U|392

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BY

50S ribosomal protein L28