HL_6ZTL_082

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

6ZTL|1|BA|A|1780, 6ZTL|1|BA|U|1781, 6ZTL|1|BA|U|1782, 6ZTL|1|BA|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTL_082 not in the Motif Atlas

Homologous match to HL_4WF9_043

Geometric discrepancy: 0.129

The information below is about HL_4WF9_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01962.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

6ZTL|1|BA|U|1777
6ZTL|1|BA|U|1778
6ZTL|1|BA|U|1779
6ZTL|1|BA|A|1780
6ZTL|1|BA|U|1781
6ZTL|1|BA|U|1782
6ZTL|1|BA|A|1783
6ZTL|1|BA|A|1784
6ZTL|1|BA|A|1785
6ZTL|1|BA|A|1786
6ZTL|1|BA|A|1787

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2