3D structure

PDB id
6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in collided state without NusG
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
ACACGUGGUAU
Length
11 nucleotides
Bulged bases
6ZTM|1|BA|G|386
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZTM_050 not in the Motif Atlas
Homologous match to HL_5J7L_145
Geometric discrepancy: 0.1099
The information below is about HL_5J7L_145
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_91503.7
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

6ZTM|1|BA|A|382
6ZTM|1|BA|C|383
6ZTM|1|BA|A|384
6ZTM|1|BA|C|385
6ZTM|1|BA|G|386
6ZTM|1|BA|U|387
6ZTM|1|BA|G|388
6ZTM|1|BA|G|389
6ZTM|1|BA|U|390
6ZTM|1|BA|A|391
6ZTM|1|BA|U|392

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BY
50S ribosomal protein L28

Coloring options:


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