HL_6ZTN_087

3D structure

PDB id

6ZTN (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

6ZTN|1|BA|C|1870, 6ZTN|1|BA|A|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTN_087 not in the Motif Atlas

Geometric match to HL_4V88_190

Geometric discrepancy: 0.3786

The information below is about HL_4V88_190

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91015.1

Basepair signature

cWW-cWH-F

Number of instances in this motif group

4

Unit IDs

6ZTN|1|BA|C|1868
6ZTN|1|BA|G|1869
6ZTN|1|BA|C|1870
6ZTN|1|BA|A|1871
6ZTN|1|BA|A|1872
6ZTN|1|BA|G|1873

Current chains

Chain BA

23S ribosomal RNA

Nearby chains