HL_6ZU1_050

3D structure

PDB id

6ZU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6ZU1|1|BA|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU1_050 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0918

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6ZU1|1|BA|A|382
6ZU1|1|BA|C|383
6ZU1|1|BA|A|384
6ZU1|1|BA|C|385
6ZU1|1|BA|G|386
6ZU1|1|BA|U|387
6ZU1|1|BA|G|388
6ZU1|1|BA|G|389
6ZU1|1|BA|U|390
6ZU1|1|BA|A|391
6ZU1|1|BA|U|392

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BY

50S ribosomal protein L28