HL_6ZU5_003

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCAG

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|A|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_003 not in the Motif Atlas

Geometric match to HL_5J7L_176

Geometric discrepancy: 0.1912

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6ZU5|1|L50|C|106
6ZU5|1|L50|G|107
6ZU5|1|L50|C|108
6ZU5|1|L50|A|109
6ZU5|1|L50|G|110

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LG0

eL8

Chain LHH

uL29

Chain LN0

eL15

Chain LX0

uL23