HL_6ZU5_007

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCG

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|A|222

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_007 not in the Motif Atlas

Homologous match to HL_8C3A_004

Geometric discrepancy: 0.3236

The information below is about HL_8C3A_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6ZU5|1|L50|C|221
6ZU5|1|L50|A|222
6ZU5|1|L50|U|223
6ZU5|1|L50|C|224
6ZU5|1|L50|G|225

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LG0

eL8

Chain LHH

uL29

Chain LN0

eL15

Chain LX0

uL23