HL_6ZU5_017

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

6ZU5|1|L50|U|460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_017 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.3309

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.6

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

6ZU5|1|L50|C|459
6ZU5|1|L50|U|460
6ZU5|1|L50|U|461
6ZU5|1|L50|G|462

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LEE

eL32

Chain LFF

eL33

Chain LO0

uL13