HL_6ZU5_024

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCGCAG

Length

6 nucleotides

Bulged bases

6ZU5|1|L50|C|715, 6ZU5|1|L50|A|716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_024 not in the Motif Atlas

Homologous match to HL_8C3A_022

Geometric discrepancy: 0.2387

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6ZU5|1|L50|C|712
6ZU5|1|L50|C|713
6ZU5|1|L50|G|714
6ZU5|1|L50|C|715
6ZU5|1|L50|A|716
6ZU5|1|L50|G|717

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LAA

uL15

Chain LBB

eL29

Chain LOO

eL42