HL_6ZU5_027

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_027 not in the Motif Atlas

Homologous match to HL_5TBW_026

Geometric discrepancy: 0.2472

The information below is about HL_5TBW_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44398.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|G|882
6ZU5|1|L50|A|883
6ZU5|1|L50|C|884
6ZU5|1|L50|A|885
6ZU5|1|L50|C|886
6ZU5|1|L50|A|887
6ZU5|1|L50|A|888
6ZU5|1|L50|C|889

Current chains

Chain L50

25S rRNA

Nearby chains

Chain L70

5S ribosomal RNA; 5S rRNA

Chain LEE

eL32

Chain LF0

uL30

Chain LFF

eL33