HL_6ZU5_042

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCGC

Length

5 nucleotides

Bulged bases

6ZU5|1|L50|U|1596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_042 not in the Motif Atlas

Homologous match to HL_5TBW_045

Geometric discrepancy: 0.2849

The information below is about HL_5TBW_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.2

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

6ZU5|1|L50|G|1595
6ZU5|1|L50|U|1596
6ZU5|1|L50|C|1597
6ZU5|1|L50|G|1598
6ZU5|1|L50|C|1599

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LR0

eL19

Chain LW0

eL24