HL_6ZU5_052

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAGACCCCAACG

Length

13 nucleotides

Bulged bases

6ZU5|1|L50|A|2034, 6ZU5|1|L50|C|2041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_052 not in the Motif Atlas

Homologous match to HL_5TBW_055

Geometric discrepancy: 0.1646

The information below is about HL_5TBW_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.9

Basepair signature

cWW-tHH-cWW-tHS-F-F-tWW

Number of instances in this motif group

8

Unit IDs

6ZU5|1|L50|C|2030
6ZU5|1|L50|U|2031
6ZU5|1|L50|A|2032
6ZU5|1|L50|G|2033
6ZU5|1|L50|A|2034
6ZU5|1|L50|C|2035
6ZU5|1|L50|C|2036
6ZU5|1|L50|C|2037
6ZU5|1|L50|C|2038
6ZU5|1|L50|A|2039
6ZU5|1|L50|A|2040
6ZU5|1|L50|C|2041
6ZU5|1|L50|G|2042

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LBB

eL29

Chain LI0

uL16

Chain LT0

eL21