HL_6ZU5_058

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUCCGCAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_058 not in the Motif Atlas

Homologous match to HL_5TBW_061

Geometric discrepancy: 0.1843

The information below is about HL_5TBW_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|C|2231
6ZU5|1|L50|G|2232
6ZU5|1|L50|U|2233
6ZU5|1|L50|C|2234
6ZU5|1|L50|C|2235
6ZU5|1|L50|G|2236
6ZU5|1|L50|C|2237
6ZU5|1|L50|A|2238
6ZU5|1|L50|G|2239

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LI0

uL16

Chain LMM

eL40