HL_6ZU5_098

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACAGAACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_098 not in the Motif Atlas

Geometric match to HL_5J7L_219

Geometric discrepancy: 0.3954

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6ZU5|1|L50|G|2070
6ZU5|1|L50|A|2071
6ZU5|1|L50|C|2072
6ZU5|1|L50|A|2073
6ZU5|1|L50|G|2074
6ZU5|1|L50|A|2075
6ZU5|1|L50|A|2076
6ZU5|1|L50|C|2077
6ZU5|1|L50|C|2078

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LJ0

uL5

Chain LNN

Lso2