HL_6ZU9_023
3D structure
- PDB id
- 6ZU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 48S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UAUUUUGUUGGUUUCUA
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZU9_023 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.4618
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6ZU9|1|2|U|828
6ZU9|1|2|A|829
6ZU9|1|2|U|830
6ZU9|1|2|U|831
6ZU9|1|2|U|832
6ZU9|1|2|U|833
6ZU9|1|2|G|834
6ZU9|1|2|U|835
6ZU9|1|2|U|836
6ZU9|1|2|G|837
6ZU9|1|2|G|838
6ZU9|1|2|U|839
6ZU9|1|2|U|840
6ZU9|1|2|U|841
6ZU9|1|2|C|842
6ZU9|1|2|U|843
6ZU9|1|2|A|844
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain X
- 40S ribosomal protein S11-A
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