HL_6ZVI_001
3D structure
- PDB id
- 6ZVI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mbf1-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6ZVI|1|d|U|16, 6ZVI|1|d|C|17, 6ZVI|1|d|G|18, 6ZVI|1|d|G|19, 6ZVI|1|d|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZVI_001 not in the Motif Atlas
- Homologous match to HL_6ORD_035
- Geometric discrepancy: 0.3576
- The information below is about HL_6ORD_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07951.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ZVI|1|d|C|13
6ZVI|1|d|A|14
6ZVI|1|d|G|15
6ZVI|1|d|U|16
6ZVI|1|d|C|17
6ZVI|1|d|G|18
6ZVI|1|d|G|19
6ZVI|1|d|U|20
6ZVI|1|d|A|21
6ZVI|1|d|G|22
Current chains
- Chain d
- A/P-site tRNA
Nearby chains
- Chain x
- RPS15 isoform 1
Coloring options: