HL_6ZVI_019

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZVI_019 not in the Motif Atlas

Geometric match to HL_8C3A_198

Geometric discrepancy: 0.2807

The information below is about HL_8C3A_198

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_46878.1

Basepair signature

cWW-F

Number of instances in this motif group

30

Unit IDs

6ZVI|1|h|C|491
6ZVI|1|h|A|492
6ZVI|1|h|U|493
6ZVI|1|h|U|494
6ZVI|1|h|C|495
6ZVI|1|h|G|496

Current chains

Chain h

18S rRNA

Nearby chains

Chain f

mRNA