HL_6ZVI_031

3D structure

PDB id

6ZVI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mbf1-ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

6ZVI|1|h|G|1122, 6ZVI|1|h|C|1123

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZVI_031 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3144

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6ZVI|1|h|C|1121
6ZVI|1|h|G|1122
6ZVI|1|h|C|1123
6ZVI|1|h|A|1124
6ZVI|1|h|A|1125
6ZVI|1|h|G|1126

Current chains

Chain h

18S rRNA

Nearby chains