HL_7A5F_012

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GGAACAGC

Length

8 nucleotides

Bulged bases

7A5F|1|A3|A|2110, 7A5F|1|A3|G|2113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_012 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.172

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7A5F|1|A3|G|2107
7A5F|1|A3|G|2108
7A5F|1|A3|A|2109
7A5F|1|A3|A|2110
7A5F|1|A3|C|2111
7A5F|1|A3|A|2112
7A5F|1|A3|G|2113
7A5F|1|A3|C|2114

Current chains

Chain A3

16S rRNA

Nearby chains

Chain I3

39S ribosomal protein L10, mitochondrial

Chain N3

39S ribosomal protein L16, mitochondrial

Chain o3

Ribosomal protein 63, mitochondrial