HL_7A5F_048

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_048 not in the Motif Atlas

Geometric match to HL_5J7L_016

Geometric discrepancy: 0.1309

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7A5F|1|A6|C|1027
7A5F|1|A6|G|1028
7A5F|1|A6|A|1029
7A5F|1|A6|A|1030
7A5F|1|A6|A|1031
7A5F|1|A6|G|1032

Current chains

Chain A6

12S rRNA

Nearby chains

Chain L6

28S ribosomal protein S15, mitochondrial

Chain Q6

28S ribosomal protein S21, mitochondrial

Chain c6

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1