HL_7A5F_052

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

7A5F|1|A6|C|1229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_052 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.4025

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7A5F|1|A6|G|1221
7A5F|1|A6|A|1222
7A5F|1|A6|U|1223
7A5F|1|A6|A|1224
7A5F|1|A6|A|1225
7A5F|1|A6|A|1226
7A5F|1|A6|C|1227
7A5F|1|A6|C|1228
7A5F|1|A6|C|1229
7A5F|1|A6|C|1230

Current chains

Chain A6

12S rRNA

Nearby chains

Chain 24

Transfer RNA; tRNA

Chain G6

28S ribosomal protein S9, mitochondrial

Chain H6

28S ribosomal protein S10, mitochondrial