HL_7A5F_064

3D structure

PDB id

7A5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

AAUAACUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5F_064 not in the Motif Atlas

Geometric match to HL_2IL9_007

Geometric discrepancy: 0.2293

The information below is about HL_2IL9_007

Detailed Annotation

GNRA with extra near cWW

Broad Annotation

GNRA with extra near cWW

Motif group

HL_82182.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

21

Unit IDs

7A5F|1|A3|A|2901
7A5F|1|A3|A|2902
7A5F|1|A3|U|2903
7A5F|1|A3|A|2904
7A5F|1|A3|A|2905
7A5F|1|A3|C|2906
7A5F|1|A3|U|2907
7A5F|1|A3|U|2908

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 13

39S ribosomal protein L33, mitochondrial

Chain 33

39S ribosomal protein L35, mitochondrial

Chain C

Transfer RNA; tRNA