HL_7A5I_012

3D structure

PDB id

7A5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosome with A- P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGUAGCAAAA

Length

10 nucleotides

Bulged bases

7A5I|1|A3|A|1957, 7A5I|1|A3|A|1961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5I_012 not in the Motif Atlas

Homologous match to HL_7RQB_023

Geometric discrepancy: 0.1133

The information below is about HL_7RQB_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.6

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

6

Unit IDs

7A5I|1|A3|U|1954
7A5I|1|A3|G|1955
7A5I|1|A3|U|1956
7A5I|1|A3|A|1957
7A5I|1|A3|G|1958
7A5I|1|A3|C|1959
7A5I|1|A3|A|1960
7A5I|1|A3|A|1961
7A5I|1|A3|A|1962
7A5I|1|A3|A|1963

Current chains

Chain A3

16S rRNA

Nearby chains

Chain 23

39S ribosomal protein L34, mitochondrial

Chain E3

39S ribosomal protein L3, mitochondrial

Chain T3

39S ribosomal protein L22, mitochondrial

Chain Y2

nascent chain