HL_7A5J_021

3D structure

PDB id

7A5J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUACCAAAAA

Length

11 nucleotides

Bulged bases

7A5J|1|A|A|2500, 7A5J|1|A|C|2501, 7A5J|1|A|C|2502, 7A5J|1|A|A|2506

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7A5J_021 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.115

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

7A5J|1|A|U|2497
7A5J|1|A|U|2498
7A5J|1|A|U|2499
7A5J|1|A|A|2500
7A5J|1|A|C|2501
7A5J|1|A|C|2502
7A5J|1|A|A|2503
7A5J|1|A|A|2504
7A5J|1|A|A|2505
7A5J|1|A|A|2506
7A5J|1|A|A|2507

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial

Chain Y2

nascent chain