HL_7ABZ_025
3D structure
- PDB id
- 7ABZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.21 Å
Loop
- Sequence
- UCAACCCGA
- Length
- 9 nucleotides
- Bulged bases
- 7ABZ|1|1|A|887, 7ABZ|1|1|C|888, 7ABZ|1|1|C|889
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ABZ_025 not in the Motif Atlas
- Geometric match to HL_4V88_198
- Geometric discrepancy: 0.2742
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7ABZ|1|1|U|884
7ABZ|1|1|C|885
7ABZ|1|1|A|886
7ABZ|1|1|A|887
7ABZ|1|1|C|888
7ABZ|1|1|C|889
7ABZ|1|1|C|890
7ABZ|1|1|G|891
7ABZ|1|1|A|892
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain r
- 30S ribosomal protein S13
- Chain x
- 30S ribosomal protein S19
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