HL_7ABZ_075

3D structure

PDB id

7ABZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.21 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7ABZ|1|2|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ABZ_075 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2855

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ABZ|1|2|C|207
7ABZ|1|2|U|208
7ABZ|1|2|U|209
7ABZ|1|2|C|210
7ABZ|1|2|G|211
7ABZ|1|2|G|212

Current chains

Chain 2

16S ribosomal RNA

Nearby chains