3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
7AC7|1|2|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7AC7_085 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.1489
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

7AC7|1|2|G|786
7AC7|1|2|A|787
7AC7|1|2|U|788
7AC7|1|2|U|789
7AC7|1|2|A|790
7AC7|1|2|G|791
7AC7|1|2|A|792
7AC7|1|2|U|793
7AC7|1|2|A|794
7AC7|1|2|C|795
7AC7|1|2|C|796

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain 7
Transfer RNA; tRNA
Chain 8
mRNA
Chain p
30S ribosomal protein S11

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