HL_7ACJ_034

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7ACJ|1|1|U|1396, 7ACJ|1|1|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_034 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.3122

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ACJ|1|1|G|1389
7ACJ|1|1|U|1390
7ACJ|1|1|U|1391
7ACJ|1|1|A|1392
7ACJ|1|1|A|1393
7ACJ|1|1|U|1394
7ACJ|1|1|A|1395
7ACJ|1|1|U|1396
7ACJ|1|1|U|1397
7ACJ|1|1|C|1398

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23