HL_7ACJ_091

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

7ACJ|1|2|C|1031, 7ACJ|1|2|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_091 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2246

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

7ACJ|1|2|C|1027
7ACJ|1|2|C|1028
7ACJ|1|2|U|1029
7ACJ|1|2|U|1030
7ACJ|1|2|C|1031
7ACJ|1|2|G|1032
7ACJ|1|2|G|1033
7ACJ|1|2|G|1034

Current chains

Chain 2

16S ribosomal RNA

Nearby chains