HL_7ACJ_093

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7ACJ|1|2|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_093 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.2301

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

7ACJ|1|2|G|1089
7ACJ|1|2|U|1090
7ACJ|1|2|U|1091
7ACJ|1|2|A|1092
7ACJ|1|2|A|1093
7ACJ|1|2|G|1094
7ACJ|1|2|U|1095
7ACJ|1|2|C|1096

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain l

30S ribosomal protein S7

Chain z

30S ribosomal protein S21