3D structure

PDB id
7ACR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.44 Å

Loop

Sequence
UUUUGUAUAA
Length
10 nucleotides
Bulged bases
7ACR|1|1|A|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ACR_017 not in the Motif Atlas
Homologous match to HL_7RQB_018
Geometric discrepancy: 0.1865
The information below is about HL_7RQB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

7ACR|1|1|U|566
7ACR|1|1|U|567
7ACR|1|1|U|568
7ACR|1|1|U|569
7ACR|1|1|G|570
7ACR|1|1|U|571
7ACR|1|1|A|572
7ACR|1|1|U|573
7ACR|1|1|A|574
7ACR|1|1|A|575

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain b
50S ribosomal protein L32

Coloring options:


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