HL_7AJU_026
3D structure
- PDB id
- 7AJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AGAAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AJU_026 not in the Motif Atlas
- Homologous match to HL_4V88_210
- Geometric discrepancy: 0.1235
- The information below is about HL_4V88_210
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7AJU|1|D3|A|1084
7AJU|1|D3|G|1085
7AJU|1|D3|A|1086
7AJU|1|D3|A|1087
7AJU|1|D3|A|1088
7AJU|1|D3|U|1089
Current chains
- Chain D3
- 18S rRNA
Nearby chains
- Chain D4
- U3 small nucleolar RNA; U3 snoRNA
- Chain DW
- 40S ribosomal protein S22-A
- Chain UX
- rRNA-processing protein FCF1
Coloring options: