HL_7AQD_030
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AQD_030 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.3633
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7AQD|1|A|C|1138
7AQD|1|A|G|1139
7AQD|1|A|U|1140
7AQD|1|A|A|1141
7AQD|1|A|A|1142
7AQD|1|A|U|1143
7AQD|1|A|A|1144
7AQD|1|A|G|1145
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L11
- Chain R
- Rqc2 homolog RqcH
- Chain f
- 50S ribosomal protein L36
Coloring options: