HL_7AQD_075
3D structure
- PDB id
- 7AQD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial RQC complex (Translocating State)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUCGAUCCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AQD_075 not in the Motif Atlas
- Homologous match to HL_4V7M_040
- Geometric discrepancy: 0.3859
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.2
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7AQD|1|T|G|52
7AQD|1|T|G|53
7AQD|1|T|U|54
7AQD|1|T|U|55
7AQD|1|T|C|56
7AQD|1|T|G|57
7AQD|1|T|A|58
7AQD|1|T|U|59
7AQD|1|T|C|60
7AQD|1|T|C|61
7AQD|1|T|C|62
Current chains
- Chain T
- Ala-tRNA (A/P-site)
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: