HL_7AS8_016

3D structure

PDB id

7AS8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACACGUGAAAU

Length

11 nucleotides

Bulged bases

7AS8|1|A|G|433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AS8_016 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1205

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7AS8|1|A|A|429
7AS8|1|A|C|430
7AS8|1|A|A|431
7AS8|1|A|C|432
7AS8|1|A|G|433
7AS8|1|A|U|434
7AS8|1|A|G|435
7AS8|1|A|A|436
7AS8|1|A|A|437
7AS8|1|A|A|438
7AS8|1|A|U|439

Current chains

Chain A

23S rRNA

Nearby chains

Chain b

50S ribosomal protein L28