HL_7ASN_029

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GUGAGAAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_029 not in the Motif Atlas

Homologous match to HL_7RQB_033

Geometric discrepancy: 0.0858

The information below is about HL_7RQB_033

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

7ASN|1|A|G|1318
7ASN|1|A|U|1319
7ASN|1|A|G|1320
7ASN|1|A|A|1321
7ASN|1|A|G|1322
7ASN|1|A|A|1323
7ASN|1|A|A|1324
7ASN|1|A|U|1325
7ASN|1|A|C|1326

Current chains

Chain A

23S

Nearby chains

Chain Q

50S ribosomal protein L22