HL_7ASN_036

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

AUGAGAAUU

Length

9 nucleotides

Bulged bases

7ASN|1|A|A|1678

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_036 not in the Motif Atlas

Geometric match to HL_4LX6_002

Geometric discrepancy: 0.2675

The information below is about HL_4LX6_002

Detailed Annotation

Purine riboswitch

Broad Annotation

Purine riboswitch

Motif group

HL_46333.1

Basepair signature

cWW-R-cSH

Number of instances in this motif group

11

Unit IDs

7ASN|1|A|A|1673
7ASN|1|A|U|1674
7ASN|1|A|G|1675
7ASN|1|A|A|1676
7ASN|1|A|G|1677
7ASN|1|A|A|1678
7ASN|1|A|A|1679
7ASN|1|A|U|1680
7ASN|1|A|U|1681

Current chains

Chain A

23S

Nearby chains