HL_7ASN_044

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GGUAAGUUCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_044 not in the Motif Atlas

Geometric match to HL_2ZZN_004

Geometric discrepancy: 0.3555

The information below is about HL_2ZZN_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_57684.1

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

7ASN|1|A|G|1976
7ASN|1|A|G|1977
7ASN|1|A|U|1978
7ASN|1|A|A|1979
7ASN|1|A|A|1980
7ASN|1|A|G|1981
7ASN|1|A|U|1982
7ASN|1|A|U|1983
7ASN|1|A|C|1984
7ASN|1|A|C|1985

Current chains

Chain A

23S

Nearby chains

Chain G

50S ribosomal protein L14