HL_7ASN_061

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7ASN|1|A|G|2778

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_061 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.3297

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7ASN|1|A|C|2772
7ASN|1|A|U|2773
7ASN|1|A|G|2774
7ASN|1|A|A|2775
7ASN|1|A|A|2776
7ASN|1|A|A|2777
7ASN|1|A|G|2778
7ASN|1|A|C|2779
7ASN|1|A|A|2780
7ASN|1|A|U|2781
7ASN|1|A|C|2782
7ASN|1|A|U|2783
7ASN|1|A|A|2784
7ASN|1|A|A|2785
7ASN|1|A|G|2786

Current chains

Chain A

23S

Nearby chains