HL_7ASN_062

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

CUCAAAGAUGAUG

Length

13 nucleotides

Bulged bases

7ASN|1|A|A|2839

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_062 not in the Motif Atlas

Geometric match to HL_5TBW_226

Geometric discrepancy: 0.3902

The information below is about HL_5TBW_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59342.2

Basepair signature

cWW-F-F-F-F-cWW-F-F

Number of instances in this motif group

5

Unit IDs

7ASN|1|A|C|2836
7ASN|1|A|U|2837
7ASN|1|A|C|2838
7ASN|1|A|A|2839
7ASN|1|A|A|2840
7ASN|1|A|A|2841
7ASN|1|A|G|2842
7ASN|1|A|A|2843
7ASN|1|A|U|2844
7ASN|1|A|G|2845
7ASN|1|A|A|2846
7ASN|1|A|U|2847
7ASN|1|A|G|2848

Current chains

Chain A

23S

Nearby chains

Chain D

50S ribosomal protein L3

Chain b

50S ribosomal protein L32